MidnightBSD Magus

math/R-cran-proxy

Distance and Similarity Measures

License Permissions:

Events

Log

===>  Testing for R-cran-proxy-0.4.27_1
* using log directory '/magus/work/usr/mports/math/R-cran-proxy/work/proxy.Rcheck'
* using R version 4.4.0 (2024-04-24)
* using platform: amd64-portbld-midnightbsd4.0
* R was compiled by
    MidnightBSD clang version 19.1.7 (https://github.com/llvm/llvm-project.git llvmorg-19.1.7-0-gcd708029e0b2)
    GNU Fortran (MidnightBSD Ports Collection) 14.2.0
* running under: MidnightBSD m4064b 4.0 MidnightBSD 4.0 stable/4.0-n13692-7fce2466ee GENERIC amd64
* using session charset: ASCII
* using options '--no-manual --no-build-vignettes'
* checking for file 'proxy/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'proxy' version '0.4-27'
* checking package namespace information ... OK
* checking package dependencies ... NOTE
Package suggested but not available for checking: 'cba'
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package 'proxy' can be installed ... OK
* used C compiler: 'MidnightBSD clang version 19.1.7 (https://github.com/llvm/llvm-project.git llvmorg-19.1.7-0-gcd708029e0b2)'
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compiled code ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
  Running 'apply.R'
  Comparing 'apply.Rout' to 'apply.Rout.save' ... OK
  Running 'distance.R'
  Comparing 'distance.Rout' to 'distance.Rout.save' ... OK
  Running 'distcalls.R'
 ERROR
Running the tests in 'tests/distcalls.R' failed.
Last 13 lines of output:
  > for (j in c(0.5, 1, 2, 3, Inf))
  +     {cat("Minkowski: p =", j); prtest("Minkowski", p = j); cat(": OK.\n")}
  Minkowski: p = 0.5: OK.
  Minkowski: p = 1: OK.
  Minkowski: p = 2: OK.
  Minkowski: p = 3: OK.
  Minkowski: p = Inf: OK.
  > 
  > ## Levenshtein distance
  > s <- c("A", "quick", "brown", "fox", "jumps", "over", "the", "lazy", "dog")
  > all(as.matrix(dist(s, "Levenshtein")) == dist(s, s, "Levenshtein"))
  Error in pr_Levenshtein_prefun(c("A", "quick", "brown", "fox", "jumps",  : 
    Need package 'cba'!
  Calls: as.matrix ...  -> dist -> do.call -> pr_Levenshtein_prefun
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ...
  'overview.Rnw'... OK
 OK
* checking re-building of vignette outputs ... SKIPPED
* DONE

Status: 1 ERROR, 1 NOTE
See
  '/magus/work/usr/mports/math/R-cran-proxy/work/proxy.Rcheck/00check.log'
for details.

*** Error code 1

Stop.
make: stopped in /usr/mports/math/R-cran-proxy