science/openbabel
Chemistry file translation program
| Flavor |
Version |
Run |
OSVersion |
Arch |
License |
Restricted |
Status |
|
|
2.3.2 |
379 |
1.1 |
i386 |
gpl2 |
0 |
fail |
|
Events
| Machine |
Type |
Time |
Message |
| m1132 |
info |
2019-04-21 02:52:55.623427 |
Test Started |
| m1132 |
fail |
2019-04-21 02:53:32.474266 |
make build returned non-zero: 1 |
| m1132 |
fail |
2019-04-21 02:53:32.58947 |
Test complete. |
Log
[1m===> Building for openbabel-2.3.2[0m
[1/500] Building CXX object src/CMakeFiles/openbabel.dir/base.o
[2/500] Building CXX object src/CMakeFiles/openbabel.dir/alias.o
FAILED: src/CMakeFiles/openbabel.dir/alias.o
/usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -Iinclude -I/magus/work/usr/mports/science/openbabel/work/openbabel-2.3.2/data -I/magus/work/usr/mports/science/openbabel/work/openbabel-2.3.2/include -I/usr/local/include/eigen3 -O2 -pipe -fno-strict-aliasing -O2 -pipe -fno-strict-aliasing -fPIC -DOB_MODULE_PATH="\"/usr/local/lib/openbabel/2.3.2\"" -MD -MT src/CMakeFiles/openbabel.dir/alias.o -MF src/CMakeFiles/openbabel.dir/alias.o.d -o src/CMakeFiles/openbabel.dir/alias.o -c /magus/work/usr/mports/science/openbabel/work/openbabel-2.3.2/src/alias.cpp
In file included from /magus/work/usr/mports/science/openbabel/work/openbabel-2.3.2/src/alias.cpp:17:
In file included from /magus/work/usr/mports/science/openbabel/work/openbabel-2.3.2/include/openbabel/alias.h:19:
/magus/work/usr/mports/science/openbabel/work/openbabel-2.3.2/include/openbabel/shared_ptr.h:27:14: error: no member named 'tr1' in namespace 'std'
using std::tr1::shared_ptr;
~~~~~^
In file included from /magus/work/usr/mports/science/openbabel/work/openbabel-2.3.2/src/alias.cpp:17:
/magus/work/usr/mports/science/openbabel/work/openbabel-2.3.2/include/openbabel/alias.h:118:47: error: no template named 'shared_ptr'; did you mean 'std::shared_ptr'?
typedef std::vector< std::pair > > SmartsTable;
^~~~~~~~~~
std::shared_ptr
/usr/include/c++/v1/memory:3760:29: note: 'std::shared_ptr' declared here
class _LIBCPP_TYPE_VIS_ONLY shared_ptr
^
2 errors generated.
[3/500] Building CXX object src/CMakeFiles/openbabel.dir/bitvec.o
[4/500] Building CXX object src/CMakeFiles/openbabel.dir/atom.o
ninja: build stopped: subcommand failed.
===> Compilation failed unexpectedly.
Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to
the maintainer.
*** Error code 1
Stop.
make: stopped in /usr/mports/science/openbabel